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National Center for Microscopy and Imaging Research (NCMIR) Center for Research in
Biological Systems
Basic Science Building, Room 1000
University of California, San Diego
9500 Gilman Drive
Dept. Code 0608
La Jolla, CA 92093-0608 USA
Voice: (858) 534-0276
Fax: (858) 534-7497
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Research Highlight


Tomography Method Improves Resolution in Thick Samples
A novel method for acquiring data for electron tomography dramatically increases resolution and usable section thickness of stained samples, according to a NCMIR study published in the December 2004 issue of the Journal of Structural Biology.

NCMIR investigator James Bouwer developed the automated method, known as “most-probable loss (MPL) tomography,” which takes advantage of a new generation of energy-filtering intermediate voltage electron microscopes (IVEMs), such as NCMIR’s JEM-3200EF IVEM (300 kV). MPL tracks a narrow bandwidth of electrons during tilt series acquisition. Instead of targeting zero loss electrons, as in most energy-filtering applications, MPL selects a narrow energy window where the maximum number of electrons are located.

As a section is tilted during tomography, the effective thickness that the electrons transverse increases. At higher tilts, almost all electrons undergo some loss of energy (inelastic scattering).

Bouwer, with co-authors Mason R. Mackey, Albert Lawrence, Tom Deerinck, Ying Jones, Masako Terada, Maryann E. Martone, Steven Peltier, and Mark H. Ellisman, also demonstrated that MPL increases signal-to-noise versus zero-loss imaging. As a result, MPL increases the usable thickness of selectively stained samples that can be imaged by IVEM to 3 um. This technique has also been extended to high voltage applications on the 1.25MeV microscope at the Korea Basic Science Institute, in South Korea. The figure of a rat hippocampus shows a maximum intensity projection through a tomographic volume of a 2 micron thick Golgi sample stained with a copper-lead stain and acquired at 1.25MeV.

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Updated June 22, 2004