Recent News
NCMIR scientist selected to judge the annual Nikon Small World Photomicrography Competition
May 2007
—
Nikon Instruments Inc. has announced the judging panel for the 33rd International Small World Photomicrography Competition. The panel includes Thomas Deerinck, a Research Scientist at the National Center for Microscopy and Imaging Research at UCSD. The other judges chosen by Nikon for this year’s competition include John Hart, an Atmospheric and Oceanic Science Professor at University of Colorado; Malcolm Ritter, AP Science Writer; Daniel Sieberg, Science & Technology correspondent for CBS News; and Nicole Dyer, Senior Editor at Popular Science.
more
NCMIR scientist wins first place in the 2006 Olympus BioScapes International Digital Imaging Competition
December 2006
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strikingly colorful light microscopic image of mouse retina has earned first place for NCMIR scientist Thomas Deerinck in the 2006 Olympus BioScapes Digital Imaging Competition. The quadruple-fluorescence confocal image, taken as part of a study on neurofibromatosis, shows the highly complex organization of some of the different cell types present in the retina.
more
NCMIR, NBCR, CalIT2, and EVL demonstrate integrated environment for the development of multiscale, multimodal, multi-site science at SC06
November 2006
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Collaborators from the National Biomedical Computation Resource (NBCR), the California Institute for Telecommunications and Information Technology (CalIT2), the University of Illinois' Electronic Visualization Laboratory (EVL), and NCMIR demonstrate how researchers at multiple locations can take advantage of advanced networks, software, and computational resources to extend the capabilities of bioscience instrumentation and informatics at the 2006 Super Computing Conference.
more
NCMIR-Osaka Team Among Finalists in SC06’s High Performance Computing Analytics Challenge 
October 16, 2006
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NCMIR’s “Computational Oral and Speech Science on E-science Infrastructure” team will face off against other finalists in the SC06
High Performance Computing (HPC) Analytics Challenge, during a special session of the annual Super Computing Conference on November 14th
. SC06 is the premier international conference on high performance computing, networking and storage. SC06 will be held November 11-17, 2006, in Tampa, Florida.
more
Ellisman presents NCMIR research to Japanese Royals
September 2006
—
At the invitation of Japan’s Emperor Akihito, Mark Ellisman presented an overview of NCMIR’s research on multi-scale imaging and multi-scale modeling of the nervous system. Ellisman presented a multimedia poster and summarized research advances made possible by an alliance of leading researchers in biology and brain research, as well as advanced computing technologies.
more
NCMIR, NASA researchers team up, featured in Marine Biology
September 2006
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Tiffany Moisan of NASA’s Goddard Space Flight Center at Wallops Island Virgina teamed up with NCMIR researchers to investigate the morphological changes associated with a marine alga,
Phaeocystis antarctica, grown in light-limiting and high light environments. Their study, reported in the journal
Marine Biology, presents the first 3D structures determined by electron tomography of an ecologically important phytoplankton species.
more
NCMIR's Telescience is featured in Science Grid This Week, August 2, 2006. 
August 2006
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The Telescience™ Project started over a decade ago as an effort to make rare scientific instruments globally accessible. Researchers at the National Center for Microscopy and Imaging Research began developing technologies to remotely control bio-imaging instruments over the Internet, and in 1992 the first system was demonstrated when attendees at a conference in Chicago interactively acquired and viewed images from one of NCMIR's intermediate voltage electron microscopes in San Diego.
more
NCMIR's TxBR reconstruction method featured in Journal of Structural Biology
May 2006
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Albert Lawrence and NCMIR colleagues from the Center for Research in Biological Systems (CRBS) recently published a technique to increase the resolution of electron microscope-derived tomograms. A major benefit of the mathematically sophisticated model is the ease of adapting the code for parallel computation.
more
NCMIR's Quantum Dots research featured in Nature Methods
October 2005
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Cell biologists at UCSD’s National Center for Microscopy and Imaging Research (NCMIR) demonstrate the suitability of Quantum dots (QDs) for determining the specific location of endogenous proteins in cells and tissues—using correlated light and electron imaging techniques.
more
NCMIR, SALK scientists animate synaptic transmission, featured in Science
July 2005
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In a collaboration between computational neuroscientists and neuroanatomists, researchers have created a 3-D, nano-scale “anatomically correct” neuronal synapse that provides new insights into the way synapses work.
more
Science
Highlights CCDB in "NetWatch"
March 2005
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The Cell Centered Database (
CCDB)
was featured in the journal
Science’s “NetWatch”
column, which named the site as a novel way of making microscopic
imaging data available to the science community...
more
NCMIR Featured in Bio-IT World
December 2004
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NCMIR’s “BioWall,” a newly designed 20-tile wall of high-resolution flat-panel displays that project massive, detailed 2D and 3D images of the brain, was featured in
Bio-IT World this month.
more
Rat Cerebellum Image Wins Light Microscopy Award
November 2004
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NCMIR microscopist Thomas Deerinck's image of a rat cerebellum won fifth place in the Olympus Bioscapes International Digital Imaging Competition. The image, a photomicrograph of a section of rat cerebellum, was achieved using Quantum Dot technology and multiphoton microscopy.
more
NCMIR, BioWall Featured in The Scientist, San Diego Union-Tribune, and TechTarget
October 2004—
NCMIR's newly constructed BioWall tiled display, a 20-tile wall of flat-panel displays that project massive, detailed 2D and 3D images of the brain, has been featured in a variety of publications in recent months.
An article in the San Diego Union-Tribune, which recognized San Diego as the "world center for research in neuroscience," profiled several San Diego-based neuroscience research groups, including the Biomedical Informatics Research Network (BIRN). The article pictured NCMIR Director and BIRN Coordinating Center Director Mark H. Ellisman before an image of a rat cerebellum projected onto the BioWall...more
NCMIR Represented at Microscopy and Microanalysis

Aug. 2, 2004, Savannah, GA—
The annual Microscopy and Microanalysis conference featured NCMIR researchers demonstrating advances in imaging techniques.
Dr. Diana L. Price's presentation, titled "Application of a Multi-Photon High-Resolution Large-Scale Montage Imaging Technique to Characterize Transgenic Mouse Models of Human Neurodisorders," won this year's M&M Traveling Poster Award.
more
Undergrads Explore NCMIR Cyberinfrastructure in Japan
August 2004—
As part of a National Science Foundation project that prepares engineering students for the global workforce, two UCSD undergraduates are spending their summer enhancing NCMIR's cyberinfrastructure at Japan 's Osaka University. more
NCMIR Exhibits Remote Control Microscopy in Europe

January 2004, Brussels—
Scientists in Belgium operated NCMIR's electron microscope in San Diego via the Internet as part of an international forum to promote global research networking.
more
Telescience and BIRN Cited in Wired Magazine
April 2004—
Wired magazine's April 2004
issue named NCMIR's Telescience Project and the
Biomedical Informatics Research Network (BIRN)
as successful models of grid computing.
more
Argentinian Researchers Use Telescience
to Study Microscopic Biological Structures
November 2003—
To help understand the effects of oxygen deprivation on brain synapses in infants, a researcher from Argentina plans to use electron microscopy and tomography tools offered by NCMIR's Telescience.
Telescience Recognized for Facilitating Biomedical
Research on a Global Network
November 2003—
Telescience participants at Supercomputing 2003
demonstrated remote microscope manipulation, high
bandwidth over the next generation Internet protocol
(IPv6), and web portal options for collaborative
international research. Telescience won "Best
Application" during the annual Bandwidth
Challenge. more
Telescience
Enlisted in Fight Against SARS
July 2003, Taiwan—
Since February, more than 8000 cases of Severe Acute Respiratory
Syndrome (SARS) and 600 deaths have been reported to the World
Health Organization. When researchers from Taiwan, one of the
hardest hit regions, began looking for ways to help combat the
spread of the virus, they recognized the potential value of Telescience
technologies developed by UCSD affiliates, and contacted the National
Center for Microscopy and Imaging Research (NCMIR) for their help. more
U.S.
and Korean Researchers Link Laboratories
to Advance Microscopy and Information Technologies
May 2003—
Korean delegates from the Korean Basic Sciences
Institute (KBSI) joined UCSD Chancellor Robert
Dynes and National Center for Microscopy and Imaging
Research (NCMIR) Director Mark Ellisman recently
to sign a Memorandum of Understanding (MoU) promoting
international cooperation in information technology,
advanced analytical imaging, and biomedical research.
This July, that understanding will become accomplishment
as NCMIR begins testing the boundaries of its "Telescience" technologies on Korea's
new 1.25-million-volt ultra high-voltage electron
microscope. more
TESTING